Abstract: Sequence alignment is a crucial tool in biological research. Alignment quality is typically assessed using scores, but these do not guarantee optimality. Estimating the optimal alignment ...

The reliability of multiple sequence alignment (MSA) results directly determines the credibility of the conclusions drawn from biological research. However, MSA is inherently an NP-hard problem, ...

The EMBL File Format Converter is a specialized tool that converts biological sequence data from the EMBL format to various standard formats. It streamlines bioinformatics workflows by accurately ...

Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. Non-Commercial (NC): Only non-commercial uses of the work are permitted. AlphaFold has ...

Our STOCKHOLM File Format Converter is a specialized bioinformatics utility designed to improve interoperability among multiple sequence alignments (MSAs). This tool expertly converts alignments from ...

ABSTRACT: Genomic surveillance has proven to be a critical source of information for understanding and responding to the COVID-19 pandemic. In Africa, genomic surveillance was very limited, and few ...

In order to generate links between 3 sequences and more, I had to pairwise-BLAST each couple and merge the outputs. Is there an easier way how can I generate the "link" variable for multiple ...

I hope this email finds you well. My name is Xueqin Wang, and I am currently using your tool SpruceUp for processing multiple sequence alignment data. First, I want to express my appreciation for this ...